BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B09LP1|AL425814
(824 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1366 0.0
>3x_Contig1682
Length = 16889
Score = 1366 bits (680), Expect = 0.0
Identities = 785/825 (95%), Gaps = 4/825 (0%)
Strand = Plus / Plus
Query: 1 gatcttagttaagcatttgtaaataaggcagctaagctgcttaaagtgaatgtttttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8840 gatcttagttaagcatttgtaaataaggcagctaagctgcttaaagtgaatgtttttctg 8899
Query: 61 atagttttcactgcatagtgcggggactcacaaagtgaaaacaaaaattaactactgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8900 atagttttcactgcatagtgcggggactcacaaagtgaaaacaaaaattaactactgggt 8959
Query: 121 agtaaactgacgtgtggttgcagataacgattgaacgatggttatgaccgtatatccagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 8960 agtaaactgacgtgtggttgcagataacgattgaacgatggttatgaccgt-tatccagt 9018
Query: 181 ctgaaccgtctcctcagtatacaawamaaattctgataagagataatcatgaagagaaag 240
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 9019 ctgaaccgtctcctcagtatacaatccacattctgataagagataatcatgaagagaaag 9078
Query: 241 ggcgcatcctcactatcttttcctggagaggtgttcctttcatgttttttttttgttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9079 ggcgcatcctcactatcttttcctggagaggtgttcctttcatgttttttttttgttttt 9138
Query: 301 accctggaagaatgactttttactacgttgatttctgtgttcgaggtgcggccatccccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9139 accctggaagaatgactttttactacgttgatttctgtgttcgaggtgcggccatccccg 9198
Query: 361 tgtctgagaattcaagatgtctatcggccttgatgataaacatattcgacatgagaaaaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9199 tgtctgagaattcaagatgtctatcggccttgatgataaacatattcgacatgagaccta 9258
Query: 421 tggcagacgtaaatgtgcacaactttgcaagtgtagggaaagctcttgattaaataaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259 tggcagacgtaaatgtgcacaactttgcaagtgtagggaaagctcttgattaaataaaga 9318
Query: 481 tatttacatgaaagttaagcgaagtgaagtwatttgacagaaggtgtttgtcttgttgtt 540
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 9319 tatttacatgaaagttaagcgaagtgaagtaatttgacagaaggtgtttgtcttgttgtt 9378
Query: 541 attcttattctttgatgttggaatagatctgcgtaacatcgtcgatttcttctaattgaw 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9379 attcttattctttgatgttggaatagatctgcgtaacatcgtcgatttcttctaattgat 9438
Query: 601 tgawgaatttctctnrctttgccatgtyawtcartgtcartgaaggggmtcawcgctgtc 660
||| |||||||||| ||||| ||||| | ||| ||||| ||| ||| ||| |||||||
Sbjct: 9439 tgatgaatttctctagctttg-catgtaattcagtgtcagtgacgggactcatcgctgtc 9497
Query: 661 tcttcaagaaggaaaaaatccaatcccaattctctgawawgggaaccttgawtcctcaaa 720
|||||| || | | | | |||| ||||| |||||||| | || | |||||| |||||||
Sbjct: 9498 tcttcacgaggaacatactccactcccatttctctgatatggaacccttgattcctcaac 9557
Query: 721 gtttcagccaatttgttagtctgttgagcctctgtgataacttcgaatagtgcgcta-sa 779
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9558 gtttcagccactttgttagtctgttgagcctctgtgataacttcgaatagtgcgctagca 9617
Query: 780 tcaattaccgcttgaattctcatcttgcgatgatagtggttcgct 824
|| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9618 tc-attaccgcttgaattctcatcttgcgatgatagtggttcgct 9661
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6716
Number of Sequences: 1807
Number of extensions: 6716
Number of successful extensions: 271
Number of sequences better than 1.0e-20: 1
length of query: 824
length of database: 10,358,551
effective HSP length: 16
effective length of query: 808
effective length of database: 10,329,639
effective search space: 8346348312
effective search space used: 8346348312
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)